Information for 2-WRSRGYAGCYWGKCTG (Motif 2)

C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G G T A C A G T C C G T A C T A G A C T G A G T C A C G T C T A G A G T C A G C T A T C G A G T C C G T A
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.811
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 30.0bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:9
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG-
---------TWGTCTGV
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WRSRGYAGCYWGKCTG
ATGTACAGTAGCAAAG---
 A C G T A C G T A C G T C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG-
-------VBSYGTCTGG
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG---
----GGGGCTYGKCTGGGA
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:9
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG-
---------CTGTCTGG
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---WRSRGYAGCYWGKCTG
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG
-----CAGCC------
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:WRSRGYAGCYWGKCTG-----
------GGNGCGNCTGTTNNN
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WRSRGYAGCYWGKCTG-
--GTCATGCHTGRCTGS
 C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---WRSRGYAGCYWGKCTG
NNNTTAGGTAGCNTNT---
 A C G T A C G T A C G T C G A T C T A G A T G C C T G A A C T G A G T C G T C A A C T G A G T C A G T C C G A T A C T G A C T G A G T C A C G T A C T G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T A C G T