Information for 5-ACAGAGATATATA (Motif 12)

C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T G T C A A C G T G T C A A C G T G T C A A C G T A G T C A C G T A G T C A C G T A T C G A C G T
p-value:1e-1
log p-value:-4.507e+00
Information Content per bp:1.868
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets16.5 +/- 3.5bp
Average Position of motif in Background51.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGAGATATATA----
ANNNGGATATATCCNNN
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAGAGATATATA---
GACAGAGATATCAGTGT
 A C G T C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACAGAGATATATA----
-NANTTATATATAANGN
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGATATATA
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACAGAGATATATA
DCYAAAAATAGM--
 A C G T C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACAGAGATATATA
--ANAGATAAGAA
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A
A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ACAGAGATATATA--
-AAAAAATCGATAAT
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACAGAGATATATA--
AYATGYATATGCATR
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACAGAGATATATA--
-AAAAAATCGATAAT
 C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAGATATATA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A A T G C C G T A A C T G C G T A C T A G C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A