Information for 11-CGGCTGTGTT (Motif 21)

A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
Reverse Opposite:
G C T A C G T A A G T C C G T A T A G C C G T A A C T G A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.887
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif66.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets47.7 +/- 23.7bp
Average Position of motif in Background41.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGGCTGTGTT
--GCTGTG--
 A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGGCTGTGTT
---CTTTGT-
 A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGTGTT-
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGTGTT-
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGTGTT
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCTGTGTT
CAGCTGTT--
 A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGTGTT-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGTGTT-
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCTGTGTT--
--GCTGTGGTTT
 A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CGGCTGTGTT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T A G A G T C A C G T A T C G A C G T A C T G A C G T C G A T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T