Information for 19-TGRGASAGRTCAG (Motif 20)

A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G
Reverse Opposite:
A T G C C G A T C A T G T G C A A G C T T A G C A C G T T A G C C G A T T A G C A G C T G T A C C T G A
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.700
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif378.8
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets52.0 +/- 21.6bp
Average Position of motif in Background50.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGRGASAGRTCAG--
TGACANARRCCAGRC
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGRGASAGRTCAG--
----ANAGATAAGAA
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGRGASAGRTCAG-
---NNGAGATAAGA
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGRGASAGRTCAG
----TRAGGTCA-
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGRGASAGRTCAG--
-----CAGATAAGGN
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGRGASAGRTCAG-
------AGATAAGA
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGRGASAGRTCAG--
-----NAGATAAGNN
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGRGASAGRTCAG-----
----NCAGATAAGAANNN
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGRGASAGRTCAG--------
TTTTTAGAGATAAGAAATAAAG
 A C G T A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGRGASAGRTCAG
----AGRGGTCA-
 A G C T A C T G C T G A A C T G C G T A A T C G G T C A A T C G C T G A A C G T G T A C C G T A A T C G
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T