Information for 9-CCCTGGCTCC (Motif 18)

A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C
Reverse Opposite:
A C T G T C A G G T C A C T A G T A G C T A G C C T G A A C T G A C T G T C A G
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.826
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.34%
Number of Background Sequences with motif671.2
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets57.4 +/- 22.7bp
Average Position of motif in Background51.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CCCTGGCTCC-
-----GCTCCG
 A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGCTCC---
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCCTGGCTCC---------
MACCTTCYATGGCTCCCTAKTGCCY
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G C A A G T C A G T C G A C T C A G T A T G C G A T C C T G A A C G T C T A G C T A G A G T C A C G T A G T C A G T C A G T C G A C T C G T A A C G T A G C T C T A G G A T C G A T C G A T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGCTCC---
TACCCTAGTTACCGA
 A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGCTCC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCTGGCTCC
-NTTGGCANN
 A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGCTCC
GCTCGGSCTC-
 A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGCTCC-
TTGCCATGGCAACN
 A C G T A C G T A C G T A G T C A G T C G T A C G A C T A T C G A T C G G A T C C A G T A G T C A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C