Information for 10-TGTCAGGTCAACT (Motif 10)

A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G C G A T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A G A T C C T G A
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.1 +/- 22.7bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTCAGGTCAACT
--TRAGGTCA---
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGTCAGGTCAACT
----AGGTCA---
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGGTCAACT
GTGCCACGTCATCA
 A C G T A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGGTCAACT
AATGCCACGTCATC-
 A C G T A C G T A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGGTCAACT
ATGCCACGTCATCA
 A C G T A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGTCAGGTCAACT
---AAGGTCAC--
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTCAGGTCAACT
TGTCANYT-----
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTCAGGTCAACT
--AGRGGTCA---
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGGTCAACT-
AGAGCGGGGTCAAGTA
 A C G T A C G T A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTCAGGTCAACT
ATCAAGGTCA---
 A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A C G T A A G T C C G A T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T