Information for 4-RAACCGGTTTTRB (Motif 5)

T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
Reverse Opposite:
T C A G G A T C T C G A T C G A T C G A C T G A A G T C G T A C C T A G A C T G G A C T A C G T A G T C
p-value:1e-16
log p-value:-3.833e+01
Information Content per bp:1.568
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif8.76%
Number of Background Sequences with motif1272.7
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets51.2 +/- 23.7bp
Average Position of motif in Background50.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:RAACCGGTTTTRB
AAACCGGTTT---
 T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-RAACCGGTTTTRB
NAAACCGGTTTT--
 A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:RAACCGGTTTTRB-------
AAACYKGTTWDACMRGTTTB
 T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RAACCGGTTTTRB
NCACCTGTN----
 T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RAACCGGTTTTRB
CCACCTGTTGCAT
 T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:-9
Orientation:reverse strand
Alignment:---------RAACCGGTTTTRB
AACCGGTTNNAACCGGTTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RAACCGGTTTTRB
ANCCACCTGTTGCNC
 A C G T A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RAACCGGTTTTRB
TACATCCGGGT----
 A C G T A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----RAACCGGTTTTRB
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RAACCGGTTTTRB
TACACCTGTC----
 A C G T T C A G G T C A C T G A A G T C G A T C C A T G A C T G A G C T A G C T A C G T A G C T C T A G A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T