Information for 14-CCAGTCTGGC (Motif 19)

T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C
Reverse Opposite:
A C T G T A G C T G A C C G T A T C A G C G T A A T G C C G A T C T A G A C T G
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.693
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.38%
Number of Background Sequences with motif1873.9
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets50.6 +/- 25.9bp
Average Position of motif in Background49.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCAGTCTGGC
-CTGTCTGG-
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCAGTCTGGC--
--GGTCTGGCAT
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAGTCTGGC
VBSYGTCTGG-
 A C G T T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCAGTCTGGC
-TWGTCTGV-
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGTCTGGC----
-CTGTCTGTCACCT
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCAGTCTGGC-
-----TTGGCA
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAGTCTGGC----
--TGTCTGDCACCT
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCAGTCTGGC---
----NTTGGCANN
 T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTCTGGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTCTGGC---
TCCCAGMCRAGCCCC
 A C G T A C G T T G A C G A T C G C T A T A C G G C A T A G T C C G A T A C T G A T C G T G A C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C