Information for 4-TTTGTAGACTTTCTVA (Motif 12)

A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
Reverse Opposite:
C G A T A C T G T C G A C T A G G C T A G T C A C G T A T C A G C G A T A T G C G A C T G T C A G T A C C G T A C G T A G T C A
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 22.5bp
Average Position of motif in Background59.2 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTGTAGACTTTCTVA
NNATTGGACTTTNGNN
 A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTGTAGACTTTCTVA
CAGATGTGCACATACGT-
 A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTAGACTTTCTVA
NNNNTTTGTTTACNNT----
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGACTTTCTVA
NNNTTTGTTTACNTTNN--
 A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGACTTTCTVA
NNNTTTGTTTACNTTNN--
 A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGACTTTCTVA
NNNTTTGTTTACTTTTN--
 A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTGTAGACTTTCTVA
TTTGTTTACTTA----
 A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTTGTAGACTTTCTVA
CNTGTTTACATA----
 A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGACTTTCTVA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGACTTTCTVA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A C G T G C A T A C G T A C T G C A G T C T G A A T C G C G T A A G T C A C G T A C G T C G A T A G T C A G C T T G A C G C T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T