Information for 12-GAAGGAAAGCAGC (Motif 16)

A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C C G A T A T C G A G T C A G C T A G C T A G C T A G T C A G T C A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 28.5bp
Average Position of motif in Background63.3 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAAGCAGC-
TGACANARRCCAGRC
 A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAAGCAGC----
GGAAGGAAGGAAGGAAGG
 A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGGAAAGCAGC
--AGGGTAACAGC
 A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAAAGCAGC
CGGAAGTGAAAC---
 A C G T A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAAAGCAGC--
GGGRAARRGRMCAGMTG
 A C G T A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAAGCAGC
NGAAGC--------
 A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAGGAAAGCAGC--
---AGGAAACAGCTG
 A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAAGGAAAGCAGC
----GTAAACAG-
 A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAAAGCAGC
GAGAACCGAAACTG-
 A C G T A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAAGCAGC-
AGAGRRACAGCWGAC
 A C G T A C T G C G T A C G T A C T A G A C T G C T G A C T G A C T G A C T A G A T G C C G T A A C T G G T A C A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C