Information for 6-GCAAAGACAACCADGA (Motif 12)

T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
Reverse Opposite:
C A G T A T G C G C T A C A G T C T A G C A T G C G A T A C G T C A T G C G A T A G T C A C G T A G C T A C G T A T C G A T G C
p-value:1e-13
log p-value:-3.025e+01
Information Content per bp:1.672
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif36.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.2 +/- 24.9bp
Average Position of motif in Background50.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAGACAACCADGA
TGCCAAAATAAACANN-
 A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAAAGACAACCADGA
-AAAAGTCAA------
 T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGACAACCADGA
AGAGTCCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGACAACCADGA
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAAAGACAACCADGA
GCAAAACATTACTA---
 A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGACAACCADGA
CAATTGCAAAAATAT------
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCAAAGACAACCADGA
-CAAGGHCANV-----
 T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGACAACCADGA
GGCAAAAGTCCAATAA--
 A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGACAACCADGA
AAAGATCAAAGGAA-------
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAGACAACCADGA
GGAACAAAGR---------
 A C G T A C G T A C G T T A C G A T G C G T C A T C G A C G T A C T A G C G T A G T A C C G T A C G T A G A T C G A T C G C T A C G A T A T C G G T C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T