Information for 4-AAAGGATAACCTT (Motif 8)

C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T
Reverse Opposite:
G C T A C G T A A C T G A T C G A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G C T
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.3 +/- 18.8bp
Average Position of motif in Background40.3 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGGATAACCTT
--AAGATATCCTT
 C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAAGGATAACCTT--
-----ATGACCTTGA
 C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGATAACCTT--
ANANNTGATACCCNATN
 A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAGGATAACCTT-----
-NNNNATGACCTTGANTN
 C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGATAACCTT--
AATNTTGATACCCTATN
 A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGATAACCTT
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAAGGATAACCTT---
-----ATGACCTTGAA
 C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGATAACCTT--
ANNNATGATACCCCATC
 A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAGGATAACCTT--
TATAGAGATAAGAATTG
 A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAAGGATAACCTT
AAGATAAGATAACA--
 A C G T A C G T A C G T C T G A C G T A C G T A A C T G A C T G C G T A C G A T C G T A C G T A A T G C A G T C A C G T C G A T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T