Information for 3-TGAGATYATAGWA (Motif 7)

C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A
Reverse Opposite:
A C G T C G A T A G T C A G C T C G T A A C G T C T G A C G T A A G C T A G T C A C G T A G T C G T C A
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 34.2bp
Average Position of motif in Background45.6 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAGATYATAGWA---
TAAGATTATAATACGG
 C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATYATAGWA---
NANAGATCAAAGGGNNN
 A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGAGATYATAGWA
AAAGATGATGTCATC---
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATYATAGWA---
NNNAGATCAAAGGANNN
 A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAGATYATAGWA---
TATAGATCAAAGGAAAA
 A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAGATYATAGWA--
AAAGATCAAAGGGTT
 C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGAGATYATAGWA
NGATGACGTCAT----
 A C G T A C G T A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGATYATAGWA-
--ACATCAAAGGNA
 C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAGATYATAGWA-
AAAGATCAAAGGAA
 C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGATYATAGWA---
TATAGATCAAAGGAAAA
 A C G T C A G T A C T G C G T A A C T G C T G A A C G T A G C T C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A