Information for 1-AATRAGKWGACTRAGG (Motif 2)

C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G
Reverse Opposite:
A T G C A T G C A G C T A G C T C G T A A C T G A C G T A T G C C G T A G T A C A G T C A C G T A G T C G T C A G A C T A C G T
p-value:1e-12
log p-value:-2.900e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 17.3bp
Average Position of motif in Background24.5 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:AATRAGKWGACTRAGG--
-------TGCCTGAGGCN
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AATRAGKWGACTRAGG--
-------NGCCTNAGGCN
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AATRAGKWGACTRAGG--
-------NGCCTGAGGCN
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AATRAGKWGACTRAGG
AAACATAATGAGGTTGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AATRAGKWGACTRAGG
GACGATAATGAGCTTGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AATRAGKWGACTRAGG----
-----NTNGCCTCAGGCNNN
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:AATRAGKWGACTRAGG----
--------SCCTSAGGSCAW
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AATRAGKWGACTRAGG
------TWGTCTGV--
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AATRAGKWGACTRAGG
NTAATGAGCT--------
 A C G T A C G T C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AATRAGKWGACTRAGG----
-----ATTGCCTCAGGCAAT
 C G T A C T G A A C G T T C A G C G T A A C T G C A T G C G A T A T C G G T C A A G T C A C G T C T G A C T G A A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T