Information for 5-CYACGYTTTA (Motif 17)

A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A C G T A C T G A A G T C A C T G A C G T C T A G A C T G
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 21.9bp
Average Position of motif in Background48.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CYACGYTTTA-----
---DGWTTTATGRCN
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CYACGYTTTA
ACCACGTGCTC
 A C G T A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CYACGYTTTA
GCCACGTGT--
 A C G T A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CYACGYTTTA
-CAAGCTT--
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CYACGYTTTA-----
-----TTTTATTRGN
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CYACGYTTTA----
----NTTTTATTGG
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CYACGYTTTA----
----TTTTTATTGG
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CYACGYTTTA
AACACGTGTT-
 A C G T A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CYACGYTTTA-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CYACGYTTTA----
----NTTTTATGAC
 A G T C A G T C C G T A A G T C A C T G A G C T A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C