Information for 6-TGGGCTTCCCAGA (Motif 10)

A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A A T C G A G T C A G T C G T A C C G T A
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.2 +/- 18.5bp
Average Position of motif in Background63.3 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTCCCAGA--
----TTTCCCAGAAN
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGGGCTTCCCAGA-
---ATTTCCAAGAA
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGGCTTCCCAGA
GGGGATTTCC---
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGGCTTCCCAGA
GGGGATTTCC---
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTCCCAGA--
----TTTCCTGGAAA
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGGGCTTCCCAGA--
-----TGCCCAGNHW
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGCTTCCCAGA
GGGAATTTCC---
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGGGCTTCCCAGA--
-----ATGCCAGACN
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGGCTTCCCAGA
NGGGGATTTCCC--
 A C G T A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGGCTTCCCAGA
---HTTTCCCASG
 A C G T A C T G A C T G A C T G A T G C A G C T A C G T A G T C A G T C A G T C C T G A A C T G C G T A
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G