Information for 16-CARCACACAKWCT (Motif 38)

A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G C G A T G T C A A C G T A C T G A C G T A C T G A G C T A C T G A G C T A C G T A C T G
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.888
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.9 +/- 20.9bp
Average Position of motif in Background55.2 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CARCACACAKWCT-
AGCGGCACACACGCAA
 A C G T A C G T A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CARCACACAKWCT-
CGAAGCACACAAAATA
 A C G T A C G T A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CARCACACAKWCT
TCCAATCCACA----
 A C G T A C G T A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CARCACACAKWCT
NWAACCACADNN---
 A C G T A C G T A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CARCACACAKWCT
AAACAAACATTC-
 A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CARCACACAKWCT
CTTCACACCTA--
 A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CARCACACAKWCT
---CACGCA----
 A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CARCACACAKWCT--
-----CACATTCCAT
 A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CARCACACAKWCT
-AAACCACAGAN-
 A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CARCACACAKWCT
SSAATCCACANN--
 A C G T A G T C C G T A T C A G A G T C C T G A A G T C C G T A A G T C C G T A C A G T C G T A A G T C A G C T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T