Information for 6-CCTCTTCTTA (Motif 34)

A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A
Reverse Opposite:
C G A T G C T A C T G A C A T G T G C A C T G A T A C G C T G A C A T G T A C G
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.663
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif581.6
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets57.4 +/- 30.6bp
Average Position of motif in Background50.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTCTTCTTA
--GCTTCC--
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCTTCTTA--
GCTATTTATAGC
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCTTCTTA--
TCTATTTTTAGA
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCTTCTTA--
TCTATTTATAGN
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTCTTCTTA-
-CTATTTTTGG
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTCTTCTTA-
-CTGTTCCTGG
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTTCTTA----
TTCTATTTTTAGNNN
 A C G T A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTCTTCTTA--
GCTATTTTTAGC
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTTCTTA
GTTTCACTTCCG-
 A C G T A C G T A C G T A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTCTTCTTA--------
-NTNTTCTTATCAGTNTN
 A T G C G T A C G A C T A T G C G A C T A C G T G T A C G A C T C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A