Information for 16-GGTGCTCTCCTTTGCC (Motif 29)

A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A C G T A A C T G A C T G G T C A A C T G G T C A C A T G A G T C G T C A A G T C A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.911
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 18.9bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGTGCTCTCCTTTGCC---
-----TGACCTTTGCCCTA
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGTGCTCTCCTTTGCC---
-----TGACCTTTGCCCCA
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGTGCTCTCCTTTGCC----
-----TGACCTTTGCCCTAN
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGTGCTCTCCTTTGCC-----
-----ANTCCTTTGTCTNNNN
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGCTCTCCTTTGCC
NNANTGGTGGTCTTNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GGTGCTCTCCTTTGCC
--------CCTTTGTT
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGTGCTCTCCTTTGCC
----CTGACCTTTG--
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCTCTCCTTTGCC
TCGGTGGTCGCN------
 A C G T A C G T A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGTGCTCTCCTTTGCC
NTCGCGCGCCTTNNN-
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GGTGCTCTCCTTTGCC
--------CCWTTGTY
 A C T G A C T G A C G T A C T G G A T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T C G A T A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T