Information for 12-ATAATTACTGCAG (Motif 27)

G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G A G T C C G T A A C T G A C G T C G T A G T C A A C G T C G A T C G T A C A G T
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.6 +/- 20.6bp
Average Position of motif in Background42.8 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0020.1_Dlx1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTACTGCAG
ATTAATTANCTCAN
 A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATAATTACTGCAG
GTAGTAATTAATGCAA
 A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0110.1_Nkx1-2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTACTGCAG
GTGCACTAATTAGTGCA-
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
C A T G C A G T A C T G T G A C T C G A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A C G T C T A G A T G C G C T A A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAATTACTGCAG
GGAATAATTACCTCAG
 A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G

PH0055.1_Hoxa7_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATAATTACTGCAG
TNCCATTAATTACTNC--
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATAATTACTGCAG
ANGNTAATTANCNCAN
 A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A

PH0079.1_Hoxd3/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATAATTACTGCAG
ANGNTAATTANCNCAN
 A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A

PH0103.1_Meox1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATAATTACTGCAG
GAGGTAATTACCTCAG
 A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G

Arx/MA0874.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTACTGCAG
GTCCATTAATTAATGGA-
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A A C G T

PH0003.1_Arx/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTACTGCAG
GTCCATTAATTAATGGA-
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A T C G A A C G T A C G T G T C A G T A C A C G T A C T G A G T C C G T A C A T G
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A A C G T