Information for 9-ATACAATTCACTC (Motif 20)

C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G A T C T G A A C G T
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.0 +/- 20.0bp
Average Position of motif in Background65.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATACAATTCACTC---
AATCAATTCAATAATT
 C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATACAATTCACTC
-TCCAATCCACA-
 C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATACAATTCACTC
ATAAACAATTAAACA
 A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATACAATTCACTC-
--SSAATCCACANN
 C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0177.1_Sox7_2/Jaspar

Match Rank:5
Score:0.63
Offset:-9
Orientation:reverse strand
Alignment:---------ATACAATTCACTC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATACAATTCACTC
NNCNNAACAATTNT---
 A C G T A C G T A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATACAATTCACTC
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATACAATTCACTC
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATACAATTCACTC
ACTACAATTCCC--
 A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATACAATTCACTC
GTAAACAAT------
 A C G T A C G T C G T A A G C T C G T A A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G A T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T