Information for 12-WGTGCATATATAGWGC (Motif 19)

G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
Reverse Opposite:
A T C G G A T C C G T A G A T C G A C T C T G A A C G T C T G A G C A T G C T A A G C T C A T G A G T C G T C A G A T C C G A T
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.650
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.8 +/- 26.1bp
Average Position of motif in Background61.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----WGTGCATATATAGWGC
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----WGTGCATATATAGWGC
CAGATGTGCACATACGT---
 A C G T A C G T A C G T A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----WGTGCATATATAGWGC
NNNVCTGWGYAAACASN----
 A C G T A C G T A C G T A C G T A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-WGTGCATATATAGWGC
CAAAGTAAACANNNN--
 A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:WGTGCATATATAGWGC
TGTATATATATACC--
 G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:WGTGCATATATAGWGC
TATGTAAATAT-----
 G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WGTGCATATATAGWGC
---CCATATATGG---
 G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-WGTGCATATATAGWGC
ANNNGGATATATCCNNN
 A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WGTGCATATATAGWGC
ATTTGCATACAATGG--
 A C G T G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:WGTGCATATATAGWGC
-ATGMATATDC-----
 G C T A C T A G C A G T C T A G G A T C C T G A C A G T C G T A A G C T C G T A A G C T C T G A C T A G C G A T C T A G T A G C
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T