Information for 4-CGAAMCAACM (Motif 7)

A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C T G A C T G A C G T A C G T A G T C A C T G
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.905
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.4 +/- 23.9bp
Average Position of motif in Background66.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGAAMCAACM
--NANANAC-
 A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CGAAMCAACM
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CGAAMCAACM--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CGAAMCAACM
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGAAMCAACM-------
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGAAMCAACM--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGAAMCAACM---
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAAMCAACM---
-AAACAAACATTC
 A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGAAMCAACM--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGAAMCAACM--
TACCATAGCAACGGT
 A C G T A C G T A C G T A G T C A C T G G T C A C G T A G T A C A G T C C G T A C G T A A G T C G T A C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T