Information for 3-ACGTTGTCGT (Motif 6)

T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
Reverse Opposite:
T G C A T A G C C A T G C T G A A G T C T C G A C T G A A T G C C A T G A G C T
p-value:1e-13
log p-value:-3.201e+01
Information Content per bp:1.659
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif648.5
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets42.7 +/- 25.6bp
Average Position of motif in Background48.9 +/- 40.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTGTCGT----
GNNATTTGTCGTAANN
 A C G T A C G T T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACGTTGTCGT
-CTTTGT---
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTGTCGT---
NNNTGTTGTTGTTNG
 A C G T A C G T T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0131.1_Gmeb1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACGTTGTCGT
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACGTTGTCGT
CTCATTGTC--
 A C G T T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACGTTGTCGT--
--GCTGTGGTTT
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACGTTGTCGT
CCATTGTTTT
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACGTTGTCGT
----TGACGT
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACGTTGTCGT
CCATTGTTNY
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGTTGTCGT---
-NNHTGTGGTTWN
 T C G A G T A C T A C G G A C T A G C T T C A G G A C T G T A C A T C G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G