Information for 10-CCCGGATCGCGGACCG (Motif 37)

A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C G T A G T C A G T C A C T G A G T C A C T G G C T A A C G T A G T C A G T C A T C G A C T G A C T G
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.899
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 24.7bp
Average Position of motif in Background14.2 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCCGGATCGCGGACCG--
------NCGCGGACGTTG
 A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGATCGCGGACCG
TCGTACCCGCATCATT-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCCGGATCGCGGACCG
TACCCGCATN--------
 A C G T A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CCCGGATCGCGGACCG
ACCCGGATGTA------
 A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CCCGGATCGCGGACCG
---TAATGGCGGNC--
 A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CCCGGATCGCGGACCG----
TTCAGCACCATGGACAGCGCC
 A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:CCCGGATCGCGGACCG
--CGGAGC--------
 A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGATCGCGGACCG
GTACCCGCATN--------
 A C G T A C G T A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGATCGCGGACCG
ANCAGGATGT-------
 A C G T A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:CCCGGATCGCGGACCG
--NAGGTCANTGACCT
 A G T C G T A C A T G C C T A G A C T G C G T A C G A T A G T C C T A G A G T C C T A G A C T G C G T A A G T C A G T C C T A G
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T