Information for 12-TCGTACTTCGACG (Motif 28)

A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
Reverse Opposite:
A G T C A T C G A C G T A G T C A C T G T C G A C G T A A C T G A C G T G T C A A G T C A T C G C G T A
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.863
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 19.4bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCGTACTTCGACG--
ATTGGACTTTGACCCC
 A C G T A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCGTACTTCGACG
----GCTTCC---
 A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TCGTACTTCGACG
ACTCCAAGTACTTGGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TCGTACTTCGACG
GCTCGGSCTC-----
 A C G T A C G T A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TCGTACTTCGACG-
----ACWTCAAAGG
 A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G A C G T
A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTACTTCGACG
TNNTTTCGTATTNNANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T

EHF/MA0598.2/Jaspar

Match Rank:7
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:TCGTACTTCGACG--
---TACTTCCGGGTT
 A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---TCGTACTTCGACG
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TCGTACTTCGACG------
---TCTTTCGAGGAATTTG
 A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:TCGTACTTCGACG-
NNGCNCTGCGCGGC
 A C G T A T G C A C T G A C G T G T C A A G T C A C G T A C G T A G T C A C T G C G T A A T G C A C T G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C