Information for 7-CTGCGGGCGCACGTTG (Motif 24)

A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A T A G C A C T G A C G T A C T G A G T C A C T G A G T C A G T C A T G C A T C G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.197e+01
Information Content per bp:1.920
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 23.4bp
Average Position of motif in Background54.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG
----NCGCGGACGTTG
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG
--------GCACGTAY
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG
--------GCACGTNC
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CTGCGGGCGCACGTTG--
--------GCACGTACCC
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG
-------BGCACGTA-
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGCGGGCGCACGTTG
ATAAGGGCGCGCGAT-
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:7
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG
---------CACGTG-
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG-
---------CACGTGGC
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CTGCGGGCGCACGTTG-
---------CACGTGGN
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGCGGGCGCACGTTG
------NNCCACGTGG
 A G T C C G A T A C T G A T G C A T C G C T A G A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G