Information for 9-TGAGCTGCCAGCC (Motif 16)

A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 30.2bp
Average Position of motif in Background68.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAGCTGCCAGCC--
--AGGTGNCAGACAG
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGAGCTGCCAGCC-
--AGGTGHCAGACA
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGAGCTGCCAGCC
----ATGCCAACC
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGCTGCCAGCC----
-ACTATGCCAACCTACC
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGCTGCCAGCC
CCAACTGCCA---
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGAGCTGCCAGCC
-----TGCCAA--
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAGCTGCCAGCC
---VBTGWCAGCB
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAGCTGCCAGCC
---CGTGCCAAG-
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TGAGCTGCCAGCC
--------CAGCC
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGAGCTGCCAGCC-
----ATGCCAGACN
 A C G T A C T G C G T A C T A G A G T C G A C T A C T G A G T C A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C