Information for 1-CCGCGGCTTTTTGCCC (Motif 1)

A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
Reverse Opposite:
C T A G A T C G A C T G G T A C C G T A T C G A C T G A C G T A G T C A A C T G A G T C A G T C A C T G G T A C C T A G A C T G
p-value:1e-20
log p-value:-4.830e+01
Information Content per bp:1.822
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 21.5bp
Average Position of motif in Background42.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGGCTTTTTGCCC
TACTTCCGCTTTTT----
 A C G T A C G T A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCGCGGCTTTTTGCCC
-----YCTTTGTTCC-
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCGCGGCTTTTTGCCC-
-CTTGGCANNNTGCCAA
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCGCGGCTTTTTGCCC----
-----WCATTTTGKCCTCYT
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CCGCGGCTTTTTGCCC---
----------CTGCCCGCA
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCGCGGCTTTTTGCCC
--TTGGCATGGTGCCA
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCGCGGCTTTTTGCCC
GGGGCCGAGGCCTG------
 A C G T A C G T A C G T A C G T A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCGCGGCTTTTTGCCC
-----CCWTTGTYYB-
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCGCGGCTTTTTGCCC---
-----TTTTTTTTCNNGTN
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.48
Offset:10
Orientation:forward strand
Alignment:CCGCGGCTTTTTGCCC---
----------ATGCCCACC
 A G T C G A T C A C T G A G T C A C T G C T A G G T A C A C G T A C G T A G C T A G C T A C G T C A T G A G T C A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C