Information for 7-CAGGGGAATT (Motif 31)

A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A G T C A G T C A G T C T A G C A C G T A C T G
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.923
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.6 +/- 28.0bp
Average Position of motif in Background46.1 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CAGGGGAATT---
---GGGAATTTCC
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATT
-AGAGGAA--
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATT---
-NGGGGATTTCCC
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGGAATT
ANTCCCTNGGGAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGGGGAATT-----
---GGGAATTGTAGT
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGGGAATT--
TTAAGAGGAAGTTA
 A C G T A C G T A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATT-
-AGAGGAAGTG
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGGGGAATT
CSTGGGAAAD
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGGGAATT-
-CCWGGAATGY
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGGGGAATT---
---GGGAATTTCC
 A G T C C G T A A T C G A C T G C T A G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C