Information for 17-GGCCCCCTAGCAGTGA (Motif 29)

A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
Reverse Opposite:
A C G T A T G C C G T A A G T C C G A T A C T G A G T C C G A T C G T A A C T G A C T G A C T G A C T G A T C G A G T C A G T C
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 23.5bp
Average Position of motif in Background57.6 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCCCCTAGCAGTGA
CGCCCCCTGACA----
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCCCCCTAGCAGTGA
-GACCCCCCGCTGTG-
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCCCCCTAGCAGTGA
-GACCCCCCGCTGTGC
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCCCCCTAGCAGTGA
-GACCCCCCGCTGCGC
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCCCCCTAGCAGTGA
-GGCCYCCTGCTGDGH
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCCCCTAGCAGTGA---
---NNNNTGCCAGTGATTG
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCCCCTAGCAGTGA----
---NNNANTGCAGTGCNNTT
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GGCCCCCTAGCAGTGA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCCCCTAGCAGTGA
NNNGGGGCGCCCCCNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGCCCCCTAGCAGTGA
---CCCCCTGCTGTG-
 A C T G A C T G A T G C G T A C A G T C G T A C A G T C C G A T C G T A A C T G A G T C C G T A A C T G C G A T A T C G G T C A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T