Information for 9-CGGGATCSGGKGR (Motif 28)

A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C G T C A A G T C A G T C A T G C A C T G C G T A A C G T A T G C A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.890
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.8 +/- 15.4bp
Average Position of motif in Background35.2 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGGATCSGGKGR-
----GTGGGGTGAT
 A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGGATCSGGKGR
GGGCGGGACC------
 A C G T A C G T A C G T A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGGATCSGGKGR---
-RGSMTBCTGGGAAAT
 A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGGATCSGGKGR
ACAGGATGTGGT--
 A C G T A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGGATCSGGKGR
-NGGATTAN----
 A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGGATCSGGKGR
ANCAGGATGT-----
 A C G T A C G T A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGGATCSGGKGR
-TACATCCGGGT-
 A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGGGATCSGGKGR
GGCGGGAARN-----
 A C G T A C G T A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGGGATCSGGKGR
GGGCGGGAAGG-----
 A C G T A C G T A C G T A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGGGATCSGGKGR-
----ATGGGGTGAT
 A G T C C T A G A C T G A T C G C G T A A C G T A G T C T A C G A C T G A C T G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T