Information for 6-AGCWTCASASART (Motif 5)

C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C A C G T A T G C A C G T A T G C A C G T A C T G G T C A C G A T A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.2 +/- 11.6bp
Average Position of motif in Background72.5 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGCWTCASASART-----
---CTCACACAATGGCGC
 C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCWTCASASART
AAAGATCAAAGGAA
 A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCWTCASASART
CAAGCTT--------
 A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCWTCASASART--
ATTTGCATACAATGG
 C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCWTCASASART
-GCTTCC------
 C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCWTCASASART
CAGCC---------
 A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCWTCASASART---
-GNNACCGAGAATNNN
 C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCWTCASASART--
TATAGATCAAAGGAAAA
 A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGCWTCASASART
ATTTGCATAACAAAG-
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCWTCASASART
ATTGCATCAK-----
 A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C C G T A T A C G C G T A A T C G C G T A C T A G A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T