Information for 5-CGCCTTCVTKCCTGMC (Motif 17)

G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
Reverse Opposite:
T C A G A C G T G T A C C G T A C T A G C T A G T G A C T C G A A C T G A C T G G T C A T C G A C T A G A C T G T G A C C T A G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.690
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 11.1bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC----
--CCTTCCTTCCTTCCTTCC
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC-
TGCAGTCATGCGTGACG
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCTTCVTKCCTGMC
-ACTTTCGTTTCT---
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC-
NGCANTCATGCGTGACG
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC
-----RCATTCCWGG-
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC
-----GCATTCCAGN-
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC
---NNACTTGCCTT--
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCCTTCVTKCCTGMC
GTCATGCHTGRCTGS-
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGCCTTCVTKCCTGMC
-----RCATTCCWGG-
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGCCTTCVTKCCTGMC
-----ACATTCCA---
 G A T C A C T G T A G C G A T C A G C T A C G T T G A C T G A C A C G T A C T G A G T C A G T C G C A T C A T G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T