Information for 7-CGTGGCACGT (Motif 13)

A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T
Reverse Opposite:
C G T A G A T C A C T G A C G T A C T G A T G C A G T C C G T A T G A C A C T G
p-value:1e-8
log p-value:-1.963e+01
Information Content per bp:1.860
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.2 +/- 20.4bp
Average Position of motif in Background67.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CGTGGCACGT-
---BGCACGTA
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGTGGCACGT----
--TGGCACGTGCCG
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CGTGGCACGT--
----GCACGTAY
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGTGGCACGT----
--TGGCACGTGCCA
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HEY1/MA0823.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CGTGGCACGT---
---GGCACGTGTC
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTGGCACGT---
---GACACGTGCC
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CGTGGCACGT--
----GCACGTNC
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CGTGGCACGT----
----GCACGTACCC
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CGTGGCACGT
TGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGTGGCACGT---
---GTCACGTGAN
 A G T C A C T G C G A T A C T G A T C G G T A C C G T A A G T C C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T