Information for 5-GATCCAGCCT (Motif 8)

A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
Reverse Opposite:
C T G A A C T G A T C G T A G C A C G T A T C G A T C G G C T A A C G T A T G C
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif69.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.6 +/- 31.9bp
Average Position of motif in Background54.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATCCAGCCT-
---BCAGACWA
 A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATCCAGCCT
ATAATCCC----
 A C G T A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GATCCAGCCT
-ATCCAC---
 A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATCCAGCCT-
GGCTCYAKCAYC
 A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GATCCAGCCT
----CAGCC-
 A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATCCAGCCT
GYCATCMATCAT
 A C G T A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GATCCAGCCT
DGATCRATAN-
 A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATCCAGCCT
TGACTCAGCA-
 A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GATCCAGCCT
GGTCCCGCCC
 A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GATCCAGCCT---
NRGCCCCRCCCHBNN
 A C G T A C G T A T C G G T C A C G A T A T G C A T G C C G T A A T C G A T G C A G T C A G C T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C