Information for 5-GAGGGCGCACTTC (Motif 5)

A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
Reverse Opposite:
T A C G T G C A C T G A T A C G G C A T A C T G A G T C T A C G G A T C A T G C G T A C A G C T A G T C
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.651
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif46.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.9 +/- 25.5bp
Average Position of motif in Background49.6 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCACTTC-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCACTTC
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAGGGCGCACTTC
---GGCGCGCT--
 A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCACTTC-
TGGCGCGCGCGCCTGA
 A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCGCACTTC-
NTCGCGCGCCTTNNN
 A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCGCACTTC---
NNNNTGAGCACTGTNNG
 A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGGGCGCACTTC
TGCGTGGGYG------
 A C G T A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GAGGGCGCACTTC
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGCACTTC
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGCACTTC
ANTGCGGGGGCGGN----
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C A T G A T C G C A T G A G T C A C T G G T A C C G T A A T G C G A C T A C G T A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T