Information for 15-TCAATGATCT (Motif 34)

A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A A G C T A G T C C G T A A C G T A C G T A C T G G T C A
p-value:1e-3
log p-value:-8.716e+00
Information Content per bp:1.886
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.8 +/- 21.2bp
Average Position of motif in Background50.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAATGATCT-
AGGTCANTGACCTN
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCAATGATCT-
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGATCT--
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAATGATCT
GACAATGNN--
 A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGATCT
HNRAATCAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCAATGATCT
VRAACAATGG---
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGATCT-
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCAATGATCT
GAACAATGG---
 A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAATGATCT-
---ATAATCCC
 A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCAATGATCT
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C T G C T G A A C G T A G T C A G C T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A