Information for 11-AAGCACCCTGCCTGSA (Motif 21)

T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C A G T C C G T A T C A G C T A G A G T C C T G A C T A G A C T G C T A G C G A T A C T G A G T C A G C T A C G T
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.4 +/- 28.4bp
Average Position of motif in Background58.9 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA
-----CCTCACCTG--
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AAGCACCCTGCCTGSA------
-------TTTCCTGGAAAGNNN
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.49
Offset:7
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA
-------CTGTCTGG-
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:AAGCACCCTGCCTGSA
-----RYHYACCTGB-
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AAGCACCCTGCCTGSA
---NNACTTGCCTT--
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA
-----VBSYGTCTGG-
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA--
-------CTTCTGGGAAA
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA-
-------CTTCCNGGAA
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACCCTGCCTGSA---
GAAGTANCACGAATNMRAGT
 A C G T T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AAGCACCCTGCCTGSA-----
-------TTTCCTAGAAAGCA
 T C G A C T G A C T A G G T A C C G T A A G T C A G T C A G T C G A C T T A C G A G T C A G T C C G A T A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A