Information for 20-GATGACCTTT (Motif 27)

A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A G T C
p-value:1e-6
log p-value:-1.557e+01
Information Content per bp:1.967
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.0 +/- 23.7bp
Average Position of motif in Background45.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GATGACCTTT----
NNNGTGACCTTTGNNN
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GATGACCTTT----
NNNNTGACCTTTNNNN
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GATGACCTTT----
--TGACCTTTNCNT
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GATGACCTTT-
CNNTTGACCTTTG
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GATGACCTTT-
-ATGACCTTGA
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GATGACCTTT-
-NTGACCTTGA
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GATGACCTTT----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GATGACCTTT-
-CTGACCTTTG
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GATGACCTTT
--TGACCTYA
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GATGACCTTT
--TGACCYCT
 A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T