Information for 19-CCGCCTTTGA (Motif 26)

A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A G T C A A C T G A C T G A G T C A C T G A C T G
p-value:1e-6
log p-value:-1.607e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 31.1bp
Average Position of motif in Background59.1 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCGCCTTTGA---
---CCTTTGATGT
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCGCCTTTGA---
---CCTTTGAWGT
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTTTGA
GTCCGCCATTA-
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCGCCTTTGA---
-TNCCTTTGATGT
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCGCCTTTGA-----
-TNCCTTTGATCTTN
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCGCCTTTGA-----
---CCTTTGATCTTT
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTTTGA------
ATTTCCTTTGATCTATA
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTTTGA------
AATCCCTTTGATCTATC
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCTTTGA------
NNTTCCTTTGATCTANA
 A C G T A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGCCTTTGA-
---CCTTTGTT
 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T