Information for 15-GCTTAACAGG (Motif 21)

A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G
Reverse Opposite:
A G T C G T A C A C G T C T A G G C A T A C G T T C G A C G T A A C T G G T A C
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.852
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif98.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets63.4 +/- 28.1bp
Average Position of motif in Background48.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTTAACAGG---
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTTAACAGG
--TTGACAGC
 A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PB0184.1_Tbp_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTTAACAGG-
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTTAACAGG---
-CACAGCAGGGGG
 A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAACAGG-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAACAGG-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAACAGG-----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAACAGG
NCCTTATCTG-
 A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAACAGG-----
GGATTGACAGGTCNTT
 A C G T A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTTAACAGG-----
GAGCAACAGGTGGTT
 A C T G A G T C C G A T A G C T G T C A C G T A A G T C C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T