Information for 9-AAWBTRARAWATKTAM (Motif 18)

C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
Reverse Opposite:
A C G T C G A T G T C A T G A C G C T A G A C T C G T A A C G T A G T C C G A T A G T C C T G A T G C A C G T A A C G T G A C T
p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.637
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.7 +/- 32.5bp
Average Position of motif in Background46.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0045.1_Hoxa1/Jaspar

Match Rank:1
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAWBTRARAWATKTAM---
---CTGAGCTAATTACCGT
 C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAWBTRARAWATKTAM
AAATAAGAAAAAAC---
 A C G T C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAWBTRARAWATKTAM
GAAAGTGAAAGT-----
 A C G T C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAWBTRARAWATKTAM-
---CTGAGGTAATTAAT
 C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A A C G T
A C G T A C G T A C G T A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:AAWBTRARAWATKTAM---
--------ATATTTACATA
 C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AAWBTRARAWATKTAM
AAAAATAACAAACGG--
 A C G T C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAWBTRARAWATKTAM
-AGGTGTGAAM-----
 C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAWBTRARAWATKTAM--
-GACAGAGATATCAGTGT
 C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AAWBTRARAWATKTAM
GWAAYHTGAKMC------
 A C G T A C G T C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AAWBTRARAWATKTAM
GAAACTGAAACT-----
 A C G T C G T A G T C A G C A T A C G T A G C T T C A G G C T A C T A G G T C A C G A T C T G A C G A T A C T G C A G T C G T A G T C A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T A C G T