Information for 11-AGGGCAGRGTGAC (Motif 16)

C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
Reverse Opposite:
A C T G A G C T A G T C C G T A A G T C A G T C A G T C A C G T C T A G A T G C A G T C A G T C A C G T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.1 +/- 22.0bp
Average Position of motif in Background65.0 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAGRGTGAC-
NAGGTCACNNTGACC
 A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGGGCAGRGTGAC--
AGGNCANNGTGACCT
 C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCAGRGTGAC---
CAGGTCACCGTGACCTT
 A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGRGTGAC-----
GTAGGTCACGGTGACCTACT
 A C G T A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGRGTGAC-
GTAGGTCACTGGGTCA
 A C G T A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCAGRGTGAC
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGCAGRGTGAC
AGGTCAAGGTCA-
 C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGCAGRGTGAC
AGGTCAAGGTCA-
 C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGRGTGAC
TRAGGTCA-------
 A C G T A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGRGTGAC
CAAAGGTCAG------
 A C G T A C G T A C G T C G T A C T A G A C T G T A C G A G T C C G T A A C T G C T A G A C T G C G A T A C T G C T G A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T