Information for 12-GGCGGTTTCC (Motif 14)

A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A T C G A C G T A A T G C T G A C A C T G A G T C A G T C
p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.855
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif85.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets53.6 +/- 30.2bp
Average Position of motif in Background49.7 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGGATTTCC
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGGATTTCC
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGAATTTCC
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCGGTTTCC-
NGGGGATTTCCC
 A C G T A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGCVGTTR--
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCGGTTTCC
GGGAATTTCC
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGTTTCC
BRRCVGTTDN-
 A C G T A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCGGTTTCC---
---ATTTTCCATT
 A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGTTTCC
TTGCGGTTT--
 A C G T A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGTTTCC-
CAGCTGTTTCCT
 A C G T A C T G A C T G A G T C A C T G A T C G G C A T A G C T A G C T A G T C A G T C A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T