Information for 4-GTATTCAAAG (Motif 27)

T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G
Reverse Opposite:
A T G C A C G T A C G T C G A T A T C G C G T A C G T A A C G T T G C A A T G C
p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif235.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets59.2 +/- 29.4bp
Average Position of motif in Background48.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTATTCAAAG
CGGTTTCAAA-
 A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GTATTCAAAG
-NATTCAAAT
 T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GTATTCAAAG-
-ACATCAAAGG
 T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTATTCAAAG---
AAAGATCAAAGGAA
 A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTATTCAAAG
-TATGCAAAT
 T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTATTCAAAG-
-ACWTCAAAGG
 T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTATTCAAAG----
TTGTATGCAAATTAGA
 A C G T A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTATTCAAAG----
TTGTATGCAAATTAGA
 A C G T A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTATTCAAAG----
TTGTATGCAAATTAGA
 A C G T A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTATTCAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T T A C G A C G T G T C A A C G T A C G T A T G C C G T A C G T A C G T A T A C G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A