Information for 5-AAAAAGTCCAGCT (Motif 10)

C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C A C G T A C T G A C T G C G T A A T G C A C G T A C G T A G C T A C G T A C G T
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 33.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAAAGTCCAGCT-
GGCAAAAGTCCAATAA
 A C G T A C G T C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAAGTCCAGCT
-AAAAGTCAA---
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAAAGTCCAGCT-
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAAAGTCCAGCT
GAAAAAATTGCAAGG
 A C G T A C G T C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:AAAAAGTCCAGCT----
-------CCAGCTGTTN
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AAAAAGTCCAGCT----
-------HCAGCTGDTN
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAAAAGTCCAGCT---
-----NNGCAGCTGTC
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAAAAGTCCAGCT---
-----NNGCAGCTGTT
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAAAGTCCAGCT--
YTAATTRAWWCCAGATGT
 A C G T A C G T A C G T C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AAAAAGTCCAGCT----
-------NCAGCTGCTG
 C G T A C G T A C T G A C G T A C G T A A T C G C G A T A G T C A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G