Information for 7-AAAATTGCTTSAGCAA (Motif 8)

T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
Reverse Opposite:
C G A T A C G T A T C G G T A C C G A T T A G C G T C A C G T A C T A G G T A C C G T A G T C A C G A T A C G T C A G T A C G T
p-value:1e-11
log p-value:-2.752e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 27.1bp
Average Position of motif in Background40.9 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAATTGCTTSAGCAA
GAAAAAATTGCAAGG----
 A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAATTGCTTSAGCAA
GGAATAATTACCTCAG---
 A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAAATTGCTTSAGCAA
CAGGTAATTACCTCAG---
 A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAAATTGCTTSAGCAA
CNTTAAGTACTTAANG--
 A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAATTGCTTSAGCAA
TTAAGTGCTT------
 T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATTGCTTSAGCAA
ATNNACTAATTACTTT-----
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATTGCTTSAGCAA
ANNCATTAATTGCTNGN----
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATTGCTTSAGCAA
ANNCATTAATTGCTNGN----
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAATTGCTTSAGCAA
-TAATTGATTA-----
 T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATTGCTTSAGCAA
ATTNNTTAATTGCTTGT----
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A T C G C G T A A C T G T A G C G T C A C G T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T