Information for 12-CTSTRWWCCTTGG (Motif 30)

A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C T A G A C T G G C A T C G T A A G T C C G T A A T G C C G T A A C T G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 27.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTSTRWWCCTTGG--
NNTGTTTATTTTGGCA
 A C G T A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG-
----TGACCTTGAN
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG
--CTGTTCCTGG-
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG
--BNTGDCCTTG-
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG------
---TGGACTTTGNNCTNTG
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CTSTRWWCCTTGG--
---------TTGGCA
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG-
----TGACCTTGAV
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTSTRWWCCTTGG-----
---TGGACTTTGNNCTCN
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTSTRWWCCTTGG
-TGTTTACTTAGG
 A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTSTRWWCCTTGG
CCTTTGATCTTT--
 A C G T A G T C A C G T A T C G A C G T C T A G C G A T C G T A A G T C A G T C A C G T A C G T A C T G A C T G
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T