Information for 11-TGCAAGAATCAGG (Motif 29)

A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G C G T A A C G T A C G T A G T C A G C T A G C T A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCAAGAATCAGG--
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGCAAGAATCAGG
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAAGAATCAGG-----
TGGACCAATCAGCACTCT
 A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TGCAAGAATCAGG
----CCAATCAA-
 A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCAAGAATCAGG
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCAAGAATCAGG
ATTTCCAAGAA-----
 A C G T A C G T A C G T A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGCAAGAATCAGG
ACTATGAATGAATGAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCAAGAATCAGG-
----NTAATGAGCT
 A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCAAGAATCAGG----
AAACATAATGAGGTTGC
 A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGCAAGAATCAGG----
-NNAGGGACAAGGGCNC
 A C G T A C T G A G T C C T G A C T G A A C T G C G T A C G T A A C G T A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C